{ "_id": "6acf6b0ce2d863f662951dae", "Package": "daisytools", "Title": "Reading and Visualizing Output from 'Daisy' Simulations", "Version": "1.0.1", "Authors@R": "person(\"Silas\", \"Ørting\", , \"silas@di.ku.dk\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-3081-1547\"))", "Description": "Read, transform, and visualize log files produced by\n'Daisy' simulations. Supports importing dlf output files,\nreshaping depth-dependent and time-series data, and creating\nstatic and interactive plots for exploratory analysis and\ncomparison of simulation results.", "License": "GPL (>= 3)", "Encoding": "UTF-8", "Language": "en-US", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.2", "Config/testthat/edition": "3", "VignetteBuilder": "knitr", "URL": "https://daisy-model.github.io/daisy-r-tools/, https://daisy.ku.dk/", "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev libssl-dev", "Repository": "https://daisy-model.r-universe.dev", "Date/Publication": "2026-10-07 07:09:02 UTC", "RemoteUrl": "https://github.com/daisy-model/daisy-r-tools", "RemoteRef": "HEAD", "RemoteSha": "f84987b7528df8b166845d022177bb9dbd8b7d8b", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-14 11:41:01 UTC", "User": "root" }, "Author": "Silas Ørting [aut, cre] (ORCID:\n)", "Maintainer": "Silas Ørting ", "_user": "daisy-model", "_type": "src", "_file": "daisytools_1.0.1.tar.gz", "_fileid": "https://r2.ropensci.org/dd6b6cb1895f58bcf6bacac2b4ee211658169649a5f5c73154939a471b5e6775", "_filesize": 3329857, "_sha256": "dd6b6cb1895f58bcf6bacac2b4ee211658169649a5f5c73154939a471b5e6775", "_expires": "2027-01-22T11:44:10.000Z", "_created": "2026-10-14T11:41:01.000Z", "_published": "2026-10-14T11:44:12.399Z", "_buildurl": "https://github.com/r-universe/daisy-model/actions/runs/38557918745", "_status": "success", "_host": "GitHub-Actions", "_jobs": [ { "job": 115832947859, "time": 146, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11891395890" }, { "job": 115832948099, "time": 151, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11890677066" }, { "job": 115832947692, "time": 85, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "11891450680" }, { "job": 115832947764, "time": 103, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "11891855590" }, { "job": 115831680861, "time": 192, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11890671630" }, { "job": 115832947695, "time": 109, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11891405849" }, { "job": 115832947827, "time": 86, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11891815578" }, { "job": 115832947941, "time": 80, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "11892050285" }, { "job": 115832948146, "time": 85, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11891620651" } ], "_upstream": "https://github.com/daisy-model/daisy-r-tools", "_commit": { "id": "f84987b7528df8b166845d022177bb9dbd8b7d8b", "author": "Silas Ørting ", "committer": "GitHub ", "message": "Update README.md with info that package is on CRAN", "time": 1791356942 }, "_maintainer": { "name": "Silas Ørting", "email": "silas@di.ku.dk", "login": "orting", "description": "@diku-dk.", "uuid": 2413550, "orcid": "0000-0002-3081-1547" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "cowplot", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "methods", "role": "Imports" }, { "package": "rlang", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "plotly", "role": "Imports" }, { "package": "data.table", "role": "Imports" }, { "package": "tidyr", "role": "Imports" }, { "package": "tidyselect", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "spelling", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "daisy-model", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2026-35", "n": 1 }, { "week": "2026-37", "n": 7 }, { "week": "2026-39", "n": 3 }, { "week": "2026-41", "n": 1 } ], "_tags": [ { "name": "v1.0.0", "date": "2026-09-07" }, { "name": "v1.0.1", "date": "2026-09-23" } ], "_stars": 1, "_contributors": [ { "user": "orting", "count": 61, "uuid": 2413550 } ], "_userbio": { "uuid": 147626617, "type": "organization", "name": "daisy-model", "followers": 16 }, "_downloads": { "count": 138, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/daisytools" }, "_devurl": "https://github.com/daisy-model/daisy-r-tools", "_pkgdown": "https://daisy-model.github.io/daisy-r-tools/", "_searchresults": 6, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/daisytools.html", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md" ], "_homeurl": "https://github.com/daisy-model/daisy-r-tools", "_realowner": "daisy-model", "_cranurl": true, "_releases": [ { "version": "1.0.1", "date": "2026-10-04" } ], "_exports": [ "animate_dlf", "daisy_time_to_timestamp", "depth_wide_to_long", "dir_names_to_columns", "Dlf", "drop_dir_from_names", "filter_dlfs", "mass_balance", "mass_balance_summary", "merge_dlfs", "plot_dlf", "plot_dlf_depth", "plot_mass_balance", "read_dlf", "read_dlf_dir", "read_dlf_file", "read_dlf_spawn", "strip_common_prefix_from_names", "subset_dlf", "write_dlf" ], "_help": [ { "page": "sub-Dlf-method", "title": "[ indexing on the data part of the dlf", "topics": [ "[,Dlf-method" ] }, { "page": "sub-sub-Dlf-method", "title": "[[ indexing on the data part of the dlf", "topics": [ "[[,Dlf-method" ] }, { "page": "sub-subset-Dlf-method", "title": "[[ assignment on the data part of the dlf", "topics": [ "[[<-,Dlf-method" ] }, { "page": "subset-Dlf-method", "title": "[ assignment on the data part of the dlf", "topics": [ "[<-,Dlf-method" ] }, { "page": "cash-Dlf-method", "title": "$ indexing on the data part of the dlf", "topics": [ "$,Dlf-method" ] }, { "page": "cash-set-Dlf-method", "title": "$ assignment on the data part of the dlf", "topics": [ "$<-,Dlf-method" ] }, { "page": "animate_dlf", "title": "Animate a depth dependent time series from a Dlf file", "topics": [ "animate_dlf" ] }, { "page": "daisy_time_to_timestamp", "title": "Transform daisy time columns to a single timestamp", "topics": [ "daisy_time_to_timestamp" ] }, { "page": "depth_wide_to_long", "title": "Transform wide format time series to a long format time series It is assumed that dlf@data only contains 'time_name' columns and depth columns with the format _ e.g. \"q_100\"", "topics": [ "depth_wide_to_long" ] }, { "page": "dir_names_to_columns", "title": "Remove directory part of dlf name and store it in the data slot", "topics": [ "dir_names_to_columns" ] }, { "page": "Dlf-class", "title": "Class encapsulating Daisy log file (dlf) data", "topics": [ "Dlf", "Dlf-class" ] }, { "page": "drop_dir_from_names", "title": "Remove directory part from dlf names", "topics": [ "drop_dir_from_names" ] }, { "page": "filter_dlfs", "title": "Filter a list of Dlfs", "topics": [ "filter_dlfs" ] }, { "page": "mass_balance", "title": "Calculate mass balance", "topics": [ "mass_balance" ] }, { "page": "mass_balance_summary", "title": "Mass balance summary for a set of specified variables", "topics": [ "mass_balance_summary" ] }, { "page": "merge_dlfs", "title": "Merge a list of Dlfs", "topics": [ "merge_dlfs" ] }, { "page": "plot_dlf", "title": "Plot one or more variables from one or more Dlfs. Each variable is plotted in a separate subplot.", "topics": [ "plot_dlf" ] }, { "page": "plot_dlf_depth", "title": "Plot one or more timepoints from one or more dlfs containing depth dependent time series", "topics": [ "plot_dlf_depth" ] }, { "page": "plot_mass_balance", "title": "Plot Dlf object with mass balance calculation in a control chart", "topics": [ "plot_mass_balance" ] }, { "page": "read_dlf", "title": "Read a dlf file (Daisy log file) or a directory of dlf files", "topics": [ "read_dlf" ] }, { "page": "read_dlf_dir", "title": "Walk a directory tree and read all dlf files in it.", "topics": [ "read_dlf_dir" ] }, { "page": "read_dlf_file", "title": "Read a dlf file (Daisy log file)", "topics": [ "read_dlf_file" ] }, { "page": "read_dlf_spawn", "title": "Walk a directory tree generated by daisy spawn, read all dlf files in it, and merge similar log files into one dlf.", "topics": [ "read_dlf_spawn" ] }, { "page": "strip_common_prefix_from_names", "title": "Strip common prefix from dlf names", "topics": [ "strip_common_prefix_from_names" ] }, { "page": "subset_dlf", "title": "Select the subset of measurements in a specific time range.", "topics": [ "subset_dlf" ] }, { "page": "write_dlf", "title": "Write a dlf object to a file", "topics": [ "write_dlf" ] } ], "_readme": "https://github.com/daisy-model/daisy-r-tools/raw/HEAD/README.md", "_rundeps": [ "askpass", "base64enc", "bslib", "cachem", "cli", "cowplot", "cpp11", "crosstalk", "curl", "data.table", "digest", "dplyr", "evaluate", "farver", "fastmap", "fontawesome", "fs", "generics", "ggplot2", "glue", "gtable", "highr", "htmltools", "htmlwidgets", "httr", "isoband", "jquerylib", "jsonlite", "knitr", "labeling", "later", "lazyeval", "lifecycle", "magrittr", "memoise", "mime", "openssl", "otel", "pillar", "pkgconfig", "plotly", "promises", "purrr", "R6", "rappdirs", "RColorBrewer", "Rcpp", "rlang", "rmarkdown", "S7", "sass", "scales", "stringi", "stringr", "sys", "tibble", "tidyr", "tidyselect", "tinytex", "utf8", "vctrs", "viridisLite", "withr", "xfun", "yaml" ], "_vignettes": [ { "source": "compare-simulated-and-measured-data.Rmd", "filename": "compare-simulated-and-measured-data.html", "title": "Compare simulated and measured data", "engine": "knitr::rmarkdown", "headings": [ "Read, prepare and visualize measured data", "Read, prepare and visualize simulated data", "Visualize simulated and measured data together", "Visualize simulated and measured data together for multiple variables" ], "created": "2024-08-12 07:55:25", "modified": "2026-09-07 14:02:14", "commits": 5 }, { "source": "mass-balance.Rmd", "filename": "mass-balance.html", "title": "Mass balance", "engine": "knitr::rmarkdown", "headings": [ "Mass balance summary", "Mass balance at each timestep", "Plotting mass balance" ], "created": "2024-08-30 07:58:28", "modified": "2026-09-07 14:02:14", "commits": 3 }, { "source": "daisy-02-plotting-dlfs.Rmd", "filename": "daisy-02-plotting-dlfs.html", "title": "Plotting dlfs", "engine": "knitr::rmarkdown", "headings": [ "Plotting data from a directory of dlf files", "Plotting Daisy spawn output", "Plotting depth distributed output" ], "created": "2024-09-09 07:19:34", "modified": "2026-09-07 14:02:14", "commits": 5 }, { "source": "daisy-01-reading-dlf-files.Rmd", "filename": "daisy-01-reading-dlf-files.html", "title": "Reading dlf files", "engine": "knitr::rmarkdown", "headings": [ "Reading a single dlf file", "Reading a depth distributed output", "Reading Daisy spawn output", "Reading a directory with dlf files", "Controlling which files are included" ], "created": "2024-09-09 07:19:34", "modified": "2026-09-07 14:02:14", "commits": 7 } ], "_score": 4.903089986991944, "_indexed": true, "_nocasepkg": "daisytools", "_universes": [ "daisy-model", "orting" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.1", "date": "2026-10-14T11:43:25.000Z", "distro": "resolute", "commit": "f84987b7528df8b166845d022177bb9dbd8b7d8b", "fileid": "https://r2.ropensci.org/586330f4a79db0917c181de78de70c800b24c95172fc17cf872ff5d5e2bda93a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/daisy-model/actions/runs/38557918745" }, { "r": "4.6.1", "os": "linux", "version": "1.0.1", "date": "2026-10-14T11:43:32.000Z", "distro": "resolute", "commit": "f84987b7528df8b166845d022177bb9dbd8b7d8b", "fileid": "https://r2.ropensci.org/170e48ed40b63325f3c55522549bf10c6fbab39ab0136134685cb52c454c459d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/daisy-model/actions/runs/38557918745" }, { "r": "4.5.3", "os": "mac", "version": "1.0.1", "date": "2026-10-14T11:42:37.000Z", "commit": "f84987b7528df8b166845d022177bb9dbd8b7d8b", "fileid": "https://r2.ropensci.org/ec84e5c38f72f98cdca408068f34d1c189de1278c5dd89d411c4a89516ab2aaf", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/daisy-model/actions/runs/38557918745" }, { "r": "4.6.1", "os": "mac", "version": "1.0.1", "date": "2026-10-14T11:42:51.000Z", "commit": "f84987b7528df8b166845d022177bb9dbd8b7d8b", "fileid": "https://r2.ropensci.org/ee53f11384e6512f8be21001ab20278ac662aebd416b6999fcb5433003afed48", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/daisy-model/actions/runs/38557918745" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.1", "date": "2026-10-14T11:43:10.000Z", "commit": "f84987b7528df8b166845d022177bb9dbd8b7d8b", "fileid": "https://r2.ropensci.org/55cc998b86db75201a875c5da73d860d18960f75e30f19b203c631c3a67da53f", "status": "success", "buildurl": "https://github.com/r-universe/daisy-model/actions/runs/38557918745" }, { "r": "4.7.0", "os": "win", "version": "1.0.1", "date": "2026-10-14T11:42:17.000Z", "commit": "f84987b7528df8b166845d022177bb9dbd8b7d8b", "fileid": "https://r2.ropensci.org/5d6689f94babcf760de5cca49259deead8da40cc018e5bdf4e4c7528c0b4428c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/daisy-model/actions/runs/38557918745" }, { "r": "4.5.3", "os": "win", "version": "1.0.1", "date": "2026-10-14T11:42:17.000Z", "commit": "f84987b7528df8b166845d022177bb9dbd8b7d8b", "fileid": "https://r2.ropensci.org/68551007e2aeaf54a3784570db1ab34c00e52ea9c76f7ff69e75fac3cf0ecca4", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/daisy-model/actions/runs/38557918745" }, { "r": "4.6.1", "os": "win", "version": "1.0.1", "date": "2026-10-14T11:42:20.000Z", "commit": "f84987b7528df8b166845d022177bb9dbd8b7d8b", "fileid": "https://r2.ropensci.org/9f89b57c08aad0d90e4ababe377a3c174596350661d8608eefa73d778a1e6165", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/daisy-model/actions/runs/38557918745" } ] }